Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015824879.1_cds_XP_016502144.1_15816
CDS Infomation

[gene=LOC107820375] [db_xref=GeneID:107820375] [protein=U-box domain-containing protein 35-like] [partial=5'] [protein_id=XP_016502144.1] [location=complement(join(3161..3208,3317..4069,4147..4575,4686..>4769))] [gbkey=CDS]
Sequence

GCAGAGTTGGAGGAGGAAATGAAAAGGCTAAAACTTGAACTGAAGCAAACCCTGGATATG
TACAATGAAACTTGCAGAAAACAGGCAAGAGAGATTGATCATTTGAAGTCAGAAGAGGCA
TGCAAATTAGAAGAAGCCAAGGAGGCTCAAGTGGCTGCACATGCTATGGTGGAAAAGGAG
AAGCAGAAGTGCAAGGCTGCTTTAGAAGTAGCACGGATGGCGCAGCAAATAGCAGAATTG
GAATCTCAGAAGCGAAAGCGTGTAGAACAGAAATTTCTGCATGAAGCAGAAGAGATGAAG
AAAGCACAAGATGCATTTGCCTGCAGTACAATTCCCTATAGGAGATACTCAATTGACGAA
ATTGAAGCTGCAACAAATTACTTCTCCAATTCAAAGAAGATTGGTGAAGGTGGATATGGT
CCAGTGTACAAAGCCTATCTGGATCACACTGCAGTTGCTATTAAAGTTTTAAGGTCAGAC
ATGTCACAGGGACAAACACAGTTTCAGCAAGAGCTTGATGTTCTAAACCGTTTGAGACAT
CCAAATGTGGTTCTCCTCTTGGGAGCTTGTCCGGAGTATGGTTGCCTTGTCTATGAATAT
ATGGAAAATGGCAGCTTAGAGGACAGGTTGTTCTGTAAAAACAGAAGTCCTCCTATACCA
TGGCCTGCTCGTTTCAGGATAGCTGCGGAGATTGCTGCTGCCCTTCACTTCTTTCACCGA
TCAAGACCAGAACCCATCGTGCATCGAGACCTCAAACCTGCTAATATTCTCTTGGATACT
AACTACAAAAGTAAGATTAGCGATGTTGGCTTAGCCAGATTGGTTCCAGCGTCTGTCTCC
GATAGTGTCACTCAGTTTATCATGACATCAGCTGCTGGGACATTTTGCTATATTGACCCA
GAATACCAACAGACTGGGATGCTGAATCCAAAATCAGATATTTACTCTTTGGGTATCATG
TTATTACAAATAATTACAGCAAGGCCTCCAATGGGATTGACACACCACGTCGAGAGGTCA
ATTGAAAAGGGAAATTTTGATGATATACTAGATCCATCAGTAAATGATTGGCCCTTGGAG
GAGGCTCTATCCTTCGCTAAATTGGCTTTGAAATGTTGCGAACTCAGGAGGAAGGACAGG
CCAGACCTCGGTTCAGACATATTGCCTGAATTGGAACGACTAAAAGATTTTGCATTAGAC
TATAGACGCAGAGGTCGGTTTACTTCACGTCCCACAAGTTCACAAGAAAGCTTAGCAGTG
ACTGAGGAAGTAAGACGCGGCATTTCTGACAACCAATCAGATAAAGTACCATAA

Peptide Sequence

PEP ID

XP_016502144.1
PEP Infomation

PREDICTED: U-box domain-containing protein 35-like, partial [Nicotiana tabacum]
Sequence

AELEEEMKRLKLELKQTLDMYNETCRKQAREIDHLKSEEACKLEEAKEAQVAAHAMVEKE
KQKCKAALEVARMAQQIAELESQKRKRVEQKFLHEAEEMKKAQDAFACSTIPYRRYSIDE
IEAATNYFSNSKKIGEGGYGPVYKAYLDHTAVAIKVLRSDMSQGQTQFQQELDVLNRLRH
PNVVLLLGACPEYGCLVYEYMENGSLEDRLFCKNRSPPIPWPARFRIAAEIAAALHFFHR
SRPEPIVHRDLKPANILLDTNYKSKISDVGLARLVPASVSDSVTQFIMTSAAGTFCYIDP
EYQQTGMLNPKSDIYSLGIMLLQIITARPPMGLTHHVERSIEKGNFDDILDPSVNDWPLE
EALSFAKLALKCCELRRKDRPDLGSDILPELERLKDFALDYRRRGRFTSRPTSSQESLAV
TEEVRRGISDNQSDKVP

Transcript Sequence

Gene sequence data has not been registered.